Our Publications
2025
12. Xuehao Xiu#, Yi Wu#, Jiangxue Li#, Dongfa Lin, Xiao Sun, Xinglei Su, Zhi Weng, Xiaolei Zuo, Xiurong Yang, Chunhai Fan, Yudong Wang*,David Yu Zhang, Ping Song*, Anchored random reverse primer sequencing for quantitative detection of novel gene fusions, Nature Biomedical Engineering, 2025, Accepted.
11. Zhi Weng, Jiangxue Li, Yi Wu, Xuehao Xiu, Fei Wang, Xiaolei Zuo, Ping Song, and Chunhai Fan. “Massively parallel homogeneous amplification of chip-scale DNA for DNA information storage (MPHAC-DIS).” Nature Communications 16, no. 1 (2025): 667.
10. Hongyu Shen, Zhi Weng, Haipei Zhao, Haitao Song, Fei Wang, Chunhai Fan, and Ping Song. “Random Sanitization in DNA information storage using CRISPR-Cas12a.” Journal of the American Chemical Society 146, no. 51 (2024): 35155-35164.
2024
9. Yi Wu#, Dr. Jinxiao Guo#, Wenjun Li, Xuehao Xiu, Deepak Thirunavukarasu, Dr. Yudong Wang, Prof. Kai Wang, Dr. Weiyu Chen, Prof. David Yu Zhang, Prof. Xiurong Yang, Prof. Chunhai Fan, Prof. Ping Song*. Enhanced Detection of Novel Low-Frequency Gene Fusions via High-Yield Ligation and Multiplexed Enrichment Sequencing. Angew Chem Int Ed 2024.
8. Yunpei Si#, Xiawen Wang#, Xinglei Su#, Zhi Wong, Qiongzheng Hu, Qian Li, Chunhai Fan, David Yu Zhang, Yunshan Wang, Shihua Luo, Ping Song*. Extended Enrichment for Ultrasensitive Detection of Low-Frequency Mutations by Long Blocker Displacement Amplification. Angew Chem Int Ed 2024.
2023
7. Ping Song*, Chunhai Fan*. Selecting aptamers with programmed affinities. Nature Chemistry 2023.
6. Haipei Zhao, Xuehao Xiu, Mingqiang Li, Shaobo Dai, Mingyang Gou, Leyang Tao, Xiaolei Zuo*, Chunhai Fan, Zhongqun Tian, Ping Song*. Programming super DNA-enzyme molecules for on-demand enzyme activity modulation. Angew Chem Int Ed 2023.
2022
5. Nina G Xie#, Michael X Wang#, Ping Song, Shiqi Mao, Yifan Wang, Yuxia Yang, Junfeng Luo, Shengxiang Ren*, David Yu Zhang*. Designing highly multiplex PCR primer sets with Simulated Annealing Design using Dimer Likelihood Estimation (SADDLE). Nature Communications 13, 1881, 2022.
4. Ping Song#, Lucia Ruojia Wu#, Yan Helen Yan, Jinny X. Zhang, Tianqing Chu, Lawrence N. Kwong, Abhijit A. Patel, and David Yu Zhang*. Limitations and opportunities of technologies for the analysis of cell-free DNA in cancer diagnostics. Nature Biomedical Engineering 1-14, 2022.
2021
3. Ping Song, Sherry X. Chen, Yan Helen Yan, Alessandro Pinto, Lauren Y. Cheng, Peng Dai, Abhijit A. Patel, and David Yu Zhang*. Selective multiplexed enrichment for the detection and quantitation of low-fraction DNA variants via low-depth sequencing. Nature Biomedical Engineering 690-701, 2021.
2020
2. Dekai Ye#, Min Li#, Tingting Zhai#, Ping Song#…Xiaolei Zuo*, Chunhai Fan*. Encapsulating living tumor cells with hybridization chain reaction. Nature Protocols 15(7), 2163-2185, 2020.
1. Ping Song#, Juwen Shen#, Dekai Ye#, Baijun Dong#… Xiaolei Zuo*, Chunhai Fan*. Programming bulk enzyme heterojunctions for biosensor development with tetrahedral DNA framework. Nature Communications 11, 838, 2020.